Project Management

John M. Drake & Andrew Park

File structure

How do you organize it all?

One project – one directory
Where do you keep the data? A designated data directory or within the project directory
Using source and auxiliary functions
A data analysis workflow, reporting, and the writing of scientific manuscripts

Keeping track of changes

Version control

Git and Github
http://github.com/taddallas

Statistically literate programming

R/Markdown

Reports
Presentations
Shiny apps
Dashboards
Books
Websites

See the gallery: http://rmarkdown.rstudio.com/gallery.html