{"id":1278,"date":"2014-07-23T02:51:50","date_gmt":"2014-07-23T02:51:50","guid":{"rendered":"http:\/\/daphnia.ecology.uga.edu\/drakelab\/?p=1278"},"modified":"2014-08-26T02:54:33","modified_gmt":"2014-08-26T02:54:33","slug":"ecological-niche-models-fit-to-presence-only-and-presence-absence-data","status":"publish","type":"post","link":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/?p=1278","title":{"rendered":"Ecological niche models fit to presence-only and presence-absence data"},"content":{"rendered":"<div id=\"attachment_1281\" style=\"width: 1010px\" class=\"wp-caption alignnone\"><a href=\"https:\/\/daphnia.ecology.uga.edu\/drakelab\/wp-content\/uploads\/2014\/08\/campanula-barbata.png\"><img loading=\"lazy\" decoding=\"async\" aria-describedby=\"caption-attachment-1281\" class=\"size-full wp-image-1281\" src=\"https:\/\/daphnia.ecology.uga.edu\/drakelab\/wp-content\/uploads\/2014\/08\/campanula-barbata.png\" alt=\"Campanula barbata\" width=\"1000\" height=\"667\" srcset=\"https:\/\/daphnia.ecology.uga.edu\/drakelab\/wp-content\/uploads\/2014\/08\/campanula-barbata.png 1000w, https:\/\/daphnia.ecology.uga.edu\/drakelab\/wp-content\/uploads\/2014\/08\/campanula-barbata-300x200.png 300w, https:\/\/daphnia.ecology.uga.edu\/drakelab\/wp-content\/uploads\/2014\/08\/campanula-barbata-768x512.png 768w\" sizes=\"auto, (max-width: 1000px) 100vw, 1000px\" \/><\/a><p id=\"caption-attachment-1281\" class=\"wp-caption-text\">Campanula barbata<\/p><\/div>\n<p>The methodology of ecological niche modeling has long been a topic of interest in the lab. A particular challenge has been\u00a0the development of methods that successfully\u00a0draw a boundary around the set of habitable conditions (the fundamental niche) using data only on species occurrences. A new study by Sean Maher, Antoine Guisan, Chris Randin and John Drake looks at a range of modeling approaches that can be fit to either presence-only or presence-absence data. Models were fit to data on 106 species in exhaustively sampled vegetation quadrats in the Swiss Alps. The combination of these data and models enabled a comparison of presence-only and presence-absence modeling approaches that could be independently validated. The upshot: When suitably fit, presence-only models can\u00a0equal the performance of presence-absence models, removing the need for &#8220;pseudo-absence&#8221; sampling and similar maneuvers needed to shoehorn ecological niche modele into a classification framework.<\/p>\n<ul>\n<li>Maher, S.P., A. Guisan, C. Randin &amp; J.M. Drake. 2014. Pattern recognition ecological niche models fit to presence-only and presence-absence data.\u00a0<em>Methods in Ecology &amp; Evolution<\/em>\u00a05:761-770. [<a href=\"http:\/\/onlinelibrary.wiley.com\/doi\/10.1111\/2041-210X.12222\/abstract\">online<\/a>]<\/li>\n<\/ul>\n","protected":false},"excerpt":{"rendered":"<p>The methodology of ecological niche modeling has long been a topic of interest in the lab. A particular challenge has been\u00a0the development of methods that&#8230;<\/p>\n","protected":false},"author":2,"featured_media":0,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[43,31,30],"tags":[],"class_list":["post-1278","post","type-post","status-publish","format-standard","hentry","category-new-paper","category-news-and-notes","category-species-distributions"],"_links":{"self":[{"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=\/wp\/v2\/posts\/1278","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=1278"}],"version-history":[{"count":2,"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=\/wp\/v2\/posts\/1278\/revisions"}],"predecessor-version":[{"id":1282,"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=\/wp\/v2\/posts\/1278\/revisions\/1282"}],"wp:attachment":[{"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=1278"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=1278"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=1278"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}