{"id":1524,"date":"2015-05-11T18:23:05","date_gmt":"2015-05-11T18:23:05","guid":{"rendered":"http:\/\/daphnia.ecology.uga.edu\/drakelab\/?p=1524"},"modified":"2015-05-18T17:55:44","modified_gmt":"2015-05-18T17:55:44","slug":"range-bagging-a-new-method-for-ecological-niche-modeling-from-presence-only-data","status":"publish","type":"post","link":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/?p=1524","title":{"rendered":"Range bagging: a new method for ecological niche modeling from presence-only data"},"content":{"rendered":"<p>Ecological niche modeling concerns the task of identifying the environmental conditions under which species persist. Niche modeling &#8212; and the mapping of species distributions it is usually used for &#8212; are often complicated by the presence of extraneous information, awkward sampling, and complex interactions. Range bagging is a new method that aims to simplify ecological niche modeling by focusing on the niche itself &#8212; viewed as a range of habitable environments. Bagging is an ensemble learning approach that renders the resulting model more stable than a single highly tuned model. In this case, it also solves the\u00a0complexity problem one encounters when trying to\u00a0identify an <em>n<\/em>-dimensional environmental (or\u00a0convex hull) for large <em>n<\/em>. See <a href=\"http:\/\/rsif.royalsocietypublishing.org\/content\/12\/107\/20150086\">here<\/a> for the details. R code is available <a href=\"http:\/\/rsif.royalsocietypublishing.org\/highwire\/filestream\/33844\/field_highwire_adjunct_files\/0\/rsif-2015-0086-File009.R\">here<\/a>.<\/p>\n<ul>\n<li>Drake, J.M. Range bagging: a new method for ecological niche modeling from presence-only data. <em>Journal of the Royal Society Interface<\/em>. [<a href=\"http:\/\/rsif.royalsocietypublishing.org\/content\/12\/107\/20150086\">online<\/a>] [<a href=\"http:\/\/rsif.royalsocietypublishing.org\/content\/royinterface\/12\/107\/20150086.full.pdf\">pdf<\/a>]<\/li>\n<\/ul>\n<p><span style=\"color: #808080;\">This work was supported by a grant from the US National Oceanic and Atmospheric Administration (agreement no. NA10NOS4780218)<\/span><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Ecological niche modeling concerns the task of identifying the environmental conditions under which species persist. Niche modeling &#8212; and the mapping of species distributions it&#8230;<\/p>\n","protected":false},"author":2,"featured_media":1532,"comment_status":"closed","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"footnotes":""},"categories":[43,31,30],"tags":[],"class_list":["post-1524","post","type-post","status-publish","format-standard","has-post-thumbnail","hentry","category-new-paper","category-news-and-notes","category-species-distributions"],"_links":{"self":[{"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=\/wp\/v2\/posts\/1524","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=\/wp\/v2\/users\/2"}],"replies":[{"embeddable":true,"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=1524"}],"version-history":[{"count":8,"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=\/wp\/v2\/posts\/1524\/revisions"}],"predecessor-version":[{"id":1541,"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=\/wp\/v2\/posts\/1524\/revisions\/1541"}],"wp:featuredmedia":[{"embeddable":true,"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=\/wp\/v2\/media\/1532"}],"wp:attachment":[{"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=1524"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=%2Fwp%2Fv2%2Fcategories&post=1524"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/daphnia.ecology.uga.edu\/drakelab\/index.php?rest_route=%2Fwp%2Fv2%2Ftags&post=1524"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}