metacom: Analysis of the elements of metacommunity structure
Functions to analyze coherence, boundary clumping, and turnover following the pattern-based metacommunity analysis of Leibold and Mikkelson 2002. The package also includes functions to visualize ecological networks, and to calculate modularity as a replacement to boundary clumping.
helminthR: an R interface to the London Natural History Museum’s host–parasite database
Programmatically access the London Natural History Museum’s helminth database.
spaero: Software for project AERO
Implements methods for anticipating the emergence and eradication of infectious diseases from surveillance time series. Also provides support for computational experiments testing the performance of such methods.
tycho2: R interface to Project Tycho 2.0 API
This R package provides a wrapper for the Project Tycho 2.0 web API.
simplifyNet: Network Sparsification
Network sparsification with a variety of novel and known network sparsification techniques. All network sparsification techniques reduce the number of edges, not the number of nodes. Network sparsification is sometimes referred to as network dimensionality reduction.